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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889092.1_cds_XP_016443776.1_38907
CDS Infomation

[gene=LOC107769105] [db_xref=GeneID:107769105] [protein=polygalacturonase-like] [protein_id=XP_016443776.1] [location=join(44421..44858,45439..45728,45998..46223,46313..46543)] [gbkey=CDS]
Sequence

ATGGCTAACTTCAATACAACTGTATCTTTGCAACTTTTCTTTTTCTCTTCTTACATATTA
CTAATACCTTCTTGTTTAGCTTACAATGTGGTTAGTTTTGGGGCTAGAGGAGATGGAAGG
ACAGACTCAACCGCGCCATTTCTTCGTGCTTGGATGGCAGCCTGCAGCTCAGCTAGGCCG
AATAACGTGTATGTTCCTCGAGGAACATACGTTATAAGGCCAGTGACGTTCACTGGCCCA
TGCCGGGGCAGAATTGAGTTCCGGATTGACGGAACTGTCATTGCTCCGGCAGATTATAAT
GTCATTGGAGGTTCTAGCTTCTGGATTTTGTTTTATAAAGTTAGTAGGCTTTCTGTCTAT
GGGGGAACAATTGATGCTAAAGGACATGGTTTTTGGTCTTGTAGAAGATCTGGTCATTCT
TGCCCTCCTGGAGCTAGGTCAATAACATTCTTGTGGTGTGATAATGTACTGCTAAGTGGA
TTGAAATCATTGAACAGCCAAATAATGAATGTGGCAATTGATTATAGCAGCCATGTGAGA
GTCCAAAATGTAAGAATAAGATCTCCAAGTGGAAGTCCAAATACAGATGGAATTCATGTG
GAGAATTCCAGGGATGTTACAATCAAAGATAGCATCATCCAAACTGGAGATGACTGCATT
TCCATTGGTCCTGGCTCAATGAATATGTTGATTCAGAAAATTGGTTGTGGCCCTGGACAT
GGCATCAGCATAGGGAGTTTGGCAAACAGTTACAACGAAGCAGGAGTTCAAAATATAACA
GTGGCAAATTCAGTATTCACTAAGACGCAAAATGGTGTAAGGATAAAGTCATGGGCAAGG
CCAAGTGATGGCTATGCTAAAAATCTCATGTTCAGAAATCTTGTTATGAGGAATGTTGGG
TTCCCCATCCTCATCGATCAAAACTATTGCCCTGAAGATAGTTGTCCTCATCAGGGTTCA
GGAGTGAAGGTGAGTGAAGTGACATACAAGAATGTGAAGGGGACATCGTCCACACAACAA
GCAATAAAATTAGATTGCAGTAATACAAGTCCATGTACTGGTATTAAATTGCAAGATATA
AAGCTCACTTTCGTGGATTATCGACTGAGAAGGCCAGCTTTAACCTACTGTAGAAATGCA
CATGGCAGACATGGTGGCACCGTCATTCCAAAGAGTTGTTTTTAA

Peptide Sequence

PEP ID

XP_016443776.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MANFNTTVSLQLFFFSSYILLIPSCLAYNVVSFGARGDGRTDSTAPFLRAWMAACSSARP
NNVYVPRGTYVIRPVTFTGPCRGRIEFRIDGTVIAPADYNVIGGSSFWILFYKVSRLSVY
GGTIDAKGHGFWSCRRSGHSCPPGARSITFLWCDNVLLSGLKSLNSQIMNVAIDYSSHVR
VQNVRIRSPSGSPNTDGIHVENSRDVTIKDSIIQTGDDCISIGPGSMNMLIQKIGCGPGH
GISIGSLANSYNEAGVQNITVANSVFTKTQNGVRIKSWARPSDGYAKNLMFRNLVMRNVG
FPILIDQNYCPEDSCPHQGSGVKVSEVTYKNVKGTSSTQQAIKLDCSNTSPCTGIKLQDI
KLTFVDYRLRRPALTYCRNAHGRHGGTVIPKSCF

Transcript Sequence

Gene sequence data has not been registered.